Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916489.1_cds_XP_016466210.1_59087
CDS Infomation

[gene=LOC107788975] [db_xref=GeneID:107788975] [protein=uncharacterized protein LOC107788975 isoform X2] [protein_id=XP_016466210.1] [location=join(104544..104867,106009..106149,106244..106609,106844..107089,108791..108883,109110..109310,109866..110081)] [gbkey=CDS]
Sequence

ATGGCTGTAAACTTGAGGAATCACAGCTTATTAATCACTTTCTTGTTCCTTTTTCATTTC
TTGCCTTGGCGGCAGATACATGGGTTAAAATCACCACTTAATCCAAAGGATATTCTGCCT
TTTTTACCAAGGCAGGTCTCATGGCCTATCCTCAACTCCCTTCACAGTGCTGTGGACTTA
TTGCCTGCTTTTGTTGGGGCTGCTTCAATCGCAGAAAACAATACACTAGAGTGGAAAGGT
GCTTGCTTTTACAAGAATACTGCTTGGTTAGAGCTTCATAATAAGTCTCAAAGTCAATTT
GGTGGAGGCACTCTTCATATCAAGGTCAGCAATGCACACAGTTGGACATGTATGGACCTT
TACATCTTTGCAACCCCATATCGTGTAACATGGGATTACTACTTTTTGTCTCGTGAACAT
ACCTTTGAAATCAAAGAGTGGAAGTCTGAAGCTGAGTTAGAATATGCCAAATATAAAGGG
ATCTCAATTTTCCTATTGCAAGCAGGAATGTTAGGAACCCTTTCAGCACTATGGGATTTT
CTCCCTTTGTTCACGAATACTGGATGGGGTGAGAACTCAAATATTGGGTTTCTAAAGAAA
CATATGGGTGCTTCATTTGAAGTACGTCCACAGCCGTGGGTCACAAACCTTACTACTGAT
GACATTCATTCTGGAGATTTTCTTGCAATATCAAAGATTAAAGGTACCTGGGGTGGTTTT
GAGACTATGGAGAAATGGGCAACAGGAGCCTATGCTGGCCATACCGCTGTTTGCTTGAGA
GATGCTGAAGGGAAACTATGGGTTGGCGAATCTGGACATGACAATGATCAGGGAGAAGAT
GTGATTGCTATACTACCATGGGATGAATGGTGGGAATTTGAGCTGACAAAAGACAATACC
AATCCACATATTGCATTGCTCCCTTTGCACCCTGACCTCCGGGCCAAGTTTAATGAAACT
GCTGCTTGGGAATATGCAAAAAGCATGGCAGGAAAACCTTATGGTTACCATAACTTAATA
TTTAGCTGGATAGACACAATTGATGGAAATTATCCTTCGCCCTTGGATGCTCATCTGGTT
GCTTCTGTCATGACTGTTTTTAACCAACTAAAGCCTGCATATGCTTCTAACTTGTGGAAT
GAAGCCTTAAACAAACGACTTGGAACTCAGAACCTTAGTCTTCCCAATATACTTGTTGAA
GTTGAAAAGCGTGGATCCTCTTTTGCCGAATTGTTGACTATTCCAGAGCAGGATGATTGG
GATTATAGTGATGGAAAGTCAGCATCATGTGTTGCTTATATTCTTGAAATGTATAAGGAA
GGAGGACTATTTGGTGAACTTGCAAGCTCAATTCAGGTTACGGAGTTCACGATAAAAGAT
GCTTATACTCTCAAGTTTTTTGAAAACAATTCAAGCCGGTTGCCAAAGTGGTGCAATGCC
GATGACAGTGTGAAGCTTCCTTTCTGTCAAATTCGTGGAAAGTATCGAATGGAATTACCC
GGATACAATACTATGGATCCATACCCCCGTATGAACGAAAGATGTCCATCTATGCCTCCG
AAATATTACAGACCTCAAGGTTGTTGA

Peptide Sequence

PEP ID

XP_016466210.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107788975 isoform X2 [Nicotiana tabacum]
Sequence

MAVNLRNHSLLITFLFLFHFLPWRQIHGLKSPLNPKDILPFLPRQVSWPILNSLHSAVDL
LPAFVGAASIAENNTLEWKGACFYKNTAWLELHNKSQSQFGGGTLHIKVSNAHSWTCMDL
YIFATPYRVTWDYYFLSREHTFEIKEWKSEAELEYAKYKGISIFLLQAGMLGTLSALWDF
LPLFTNTGWGENSNIGFLKKHMGASFEVRPQPWVTNLTTDDIHSGDFLAISKIKGTWGGF
ETMEKWATGAYAGHTAVCLRDAEGKLWVGESGHDNDQGEDVIAILPWDEWWEFELTKDNT
NPHIALLPLHPDLRAKFNETAAWEYAKSMAGKPYGYHNLIFSWIDTIDGNYPSPLDAHLV
ASVMTVFNQLKPAYASNLWNEALNKRLGTQNLSLPNILVEVEKRGSSFAELLTIPEQDDW
DYSDGKSASCVAYILEMYKEGGLFGELASSIQVTEFTIKDAYTLKFFENNSSRLPKWCNA
DDSVKLPFCQIRGKYRMELPGYNTMDPYPRMNERCPSMPPKYYRPQGC

Transcript Sequence

Gene sequence data has not been registered.